To characterize transcription factors (TFs) that binds to a specific promoter or that regulate the expression of a specific gene via its upstream promoter, two common approaches are applied. First is to employ gel shift assay with DNA binding sites of TFs that are silico-identified within the promoter. Second is to removal or knockout the binding site(s) of a specific TF in order to measure whether the expression of a promoter-linked reporter is increased or decreased. Often, a series of reporter constructs with the promoter deletions or mutations need to make because many binding sites of one or a few TFs are present within a promoter. Signosis has developed a fast method to facilitate the characterization of promoters through a revised TF activation array. This assay will help to test whether a selected 96 TFs bind to the promoter or not.
Promoter-Binding TF Profiling Array II
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Xie, X., Evans, S. E., Karmouty-Quintana, H., Lopez-Berestein, G., Wang, J., Potnuru, P., Ruan, W., Chang, C.-Y., Kheradmand, F., Huang, K., Wang, Y., Czopik, A. K., Polverino, F., Kim, J., Mills, T., Sood, A. K., Melo, M. F. V., Hu, Y., Tran, T. T., … Makarevich, O. (2026). HIF1A-dependent induction of alveolar miR-147b dampens SARS-CoV-2-associated ARDS via direct targeting of viral RNAAnesthesiology https://doi.org/10.1097/ALN.0000000000006306
- Ren, L., Deng, B., Saloura, V., Park, J., & Nakamura, Y. (2019). Melk inhibition targets cancer stem cells through downregulation of sox2 expression in head and neck cancer cells. Oncology Reports. https://doi.org/10.3892/or.2019.6988
- Rathod, M., Kelkar, M., Valvi, S., Salve, G., & De, A. (2020). FOXA1 regulation turns benzamide HDACI treatment effect-specific in BC, promoting NIS gene-mediated targeted radioiodine therapy. Molecular Therapy - Oncolytics, 19, 93–104. https://doi.org/10.1016/j.omto.2020.08.015
- Dhadve, A. C., Hari, K., Rekhi, B., Jolly, M. K., De, A., & Ray, P. (2020). Decoding molecular interplay between Runx1 and FOXO3A underlying the pulsatile IGF1R expression during acquirement of chemoresistance. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease, 1866(6), 165754. https://doi.org/10.1016/j.bbadis.2020.165754
- Pan, C.-H., Chen, C.-J., Shih, C.-M., Wang, M.-F., Wang, J.-Y., & Wu, C.-H. (2019). Oxidative stress-induced cellular senescence desensitizes cell growth and migration of vascular smooth muscle cells through down-regulation of platelet-derived growth factor receptor-beta. Aging, 11(19), 8085–8102. https://doi.org/10.18632/aging.102270




